Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC30.47■■■□□ 2.47
ShprhQ7TPQ3 Gm8495-201ENSMUST00000188740 694 ntBASIC30.47■■■□□ 2.47
ShprhQ7TPQ3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
ShprhQ7TPQ3 Gm43173-201ENSMUST00000202246 593 ntBASIC30.46■■■□□ 2.47
ShprhQ7TPQ3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
ShprhQ7TPQ3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC30.46■■■□□ 2.47
ShprhQ7TPQ3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
ShprhQ7TPQ3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ShprhQ7TPQ3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.46
ShprhQ7TPQ3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.46
ShprhQ7TPQ3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ShprhQ7TPQ3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
ShprhQ7TPQ3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ShprhQ7TPQ3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ShprhQ7TPQ3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ShprhQ7TPQ3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ShprhQ7TPQ3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Gm4430-201ENSMUST00000192413 1943 ntBASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ShprhQ7TPQ3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ShprhQ7TPQ3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ShprhQ7TPQ3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
ShprhQ7TPQ3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ShprhQ7TPQ3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
ShprhQ7TPQ3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
ShprhQ7TPQ3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC30.41■■■□□ 2.46
ShprhQ7TPQ3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
ShprhQ7TPQ3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ShprhQ7TPQ3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC30.4■■■□□ 2.46
ShprhQ7TPQ3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ShprhQ7TPQ3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ShprhQ7TPQ3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ShprhQ7TPQ3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
ShprhQ7TPQ3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ShprhQ7TPQ3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
ShprhQ7TPQ3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
ShprhQ7TPQ3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.45
ShprhQ7TPQ3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
ShprhQ7TPQ3 Gm21168-201ENSMUST00000199646 1096 ntBASIC30.39■■■□□ 2.45
ShprhQ7TPQ3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
ShprhQ7TPQ3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ShprhQ7TPQ3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ShprhQ7TPQ3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ShprhQ7TPQ3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC30.37■■■□□ 2.45
ShprhQ7TPQ3 Mir7075-201ENSMUST00000184187 82 ntBASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ShprhQ7TPQ3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC30.35■■■□□ 2.45
ShprhQ7TPQ3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
ShprhQ7TPQ3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
ShprhQ7TPQ3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ShprhQ7TPQ3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC30.34■■■□□ 2.45
ShprhQ7TPQ3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC30.34■■■□□ 2.45
ShprhQ7TPQ3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
ShprhQ7TPQ3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ShprhQ7TPQ3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ShprhQ7TPQ3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC30.33■■■□□ 2.45
ShprhQ7TPQ3 Gm7143-201ENSMUST00000222811 859 ntBASIC30.33■■■□□ 2.45
ShprhQ7TPQ3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ShprhQ7TPQ3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
ShprhQ7TPQ3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC30.32■■■□□ 2.44
ShprhQ7TPQ3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ShprhQ7TPQ3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ShprhQ7TPQ3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ShprhQ7TPQ3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ShprhQ7TPQ3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
ShprhQ7TPQ3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
ShprhQ7TPQ3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 511.7 ms