Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ubfd1Q78JW9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubfd1Q78JW9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubfd1Q78JW9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubfd1Q78JW9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ubfd1Q78JW9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubfd1Q78JW9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubfd1Q78JW9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ubfd1Q78JW9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.42■□□□□ 0.86
Ubfd1Q78JW9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Ubfd1Q78JW9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ubfd1Q78JW9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubfd1Q78JW9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubfd1Q78JW9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubfd1Q78JW9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubfd1Q78JW9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.39■□□□□ 0.85
Ubfd1Q78JW9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.39■□□□□ 0.85
Ubfd1Q78JW9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubfd1Q78JW9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ubfd1Q78JW9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ubfd1Q78JW9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubfd1Q78JW9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubfd1Q78JW9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubfd1Q78JW9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubfd1Q78JW9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ubfd1Q78JW9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubfd1Q78JW9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ubfd1Q78JW9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubfd1Q78JW9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubfd1Q78JW9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ubfd1Q78JW9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms