Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rad54bQ6PFE3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rad54bQ6PFE3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rad54bQ6PFE3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rad54bQ6PFE3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rad54bQ6PFE3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rad54bQ6PFE3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rad54bQ6PFE3 Notumos-201ENSMUST00000151998 2659 ntBASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rad54bQ6PFE3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rad54bQ6PFE3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rad54bQ6PFE3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rad54bQ6PFE3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rad54bQ6PFE3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rad54bQ6PFE3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rad54bQ6PFE3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rad54bQ6PFE3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21■□□□□ 0.95
Rad54bQ6PFE3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rad54bQ6PFE3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Gm10420-201ENSMUST00000121713 882 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Gm12366-201ENSMUST00000121722 873 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Gm5786-201ENSMUST00000085368 882 ntBASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rad54bQ6PFE3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rad54bQ6PFE3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rad54bQ6PFE3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rad54bQ6PFE3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms