Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd3Q6P9Z1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd3Q6P9Z1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.09■□□□□ 0.65
Smarcd3Q6P9Z1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd3Q6P9Z1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd3Q6P9Z1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.08■□□□□ 0.65
Smarcd3Q6P9Z1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd3Q6P9Z1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarcd3Q6P9Z1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarcd3Q6P9Z1 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Smarcd3Q6P9Z1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.06■□□□□ 0.64
Smarcd3Q6P9Z1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarcd3Q6P9Z1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd3Q6P9Z1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd3Q6P9Z1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd3Q6P9Z1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.02■□□□□ 0.64
Smarcd3Q6P9Z1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd3Q6P9Z1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd3Q6P9Z1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd3Q6P9Z1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcd3Q6P9Z1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcd3Q6P9Z1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcd3Q6P9Z1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd3Q6P9Z1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd3Q6P9Z1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd3Q6P9Z1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd3Q6P9Z1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms