Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sp140Q6NSQ5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sp140Q6NSQ5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sp140Q6NSQ5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sp140Q6NSQ5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sp140Q6NSQ5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Sp140Q6NSQ5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sp140Q6NSQ5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sp140Q6NSQ5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sp140Q6NSQ5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sp140Q6NSQ5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Gm13238-201ENSMUST00000117655 780 ntBASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Gm45444-201ENSMUST00000211394 898 ntBASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sp140Q6NSQ5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sp140Q6NSQ5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sp140Q6NSQ5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sp140Q6NSQ5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sp140Q6NSQ5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sp140Q6NSQ5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sp140Q6NSQ5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sp140Q6NSQ5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sp140Q6NSQ5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sp140Q6NSQ5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sp140Q6NSQ5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.16■□□□□ 0.98
Sp140Q6NSQ5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.16■□□□□ 0.98
Sp140Q6NSQ5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.16■□□□□ 0.98
Sp140Q6NSQ5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.15■□□□□ 0.98
Sp140Q6NSQ5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sp140Q6NSQ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sp140Q6NSQ5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Gm5921-201ENSMUST00000075898 882 ntBASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sp140Q6NSQ5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sp140Q6NSQ5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sp140Q6NSQ5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sp140Q6NSQ5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sp140Q6NSQ5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sp140Q6NSQ5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms