Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SpenQ62504 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SpenQ62504 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SpenQ62504 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SpenQ62504 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SpenQ62504 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SpenQ62504 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.01■□□□□ 0.63
SpenQ62504 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SpenQ62504 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19■□□□□ 0.63
SpenQ62504 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SpenQ62504 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19■□□□□ 0.63
SpenQ62504 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SpenQ62504 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.99■□□□□ 0.63
SpenQ62504 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SpenQ62504 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SpenQ62504 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SpenQ62504 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.99■□□□□ 0.63
SpenQ62504 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SpenQ62504 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.98■□□□□ 0.63
SpenQ62504 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SpenQ62504 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SpenQ62504 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.98■□□□□ 0.63
SpenQ62504 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SpenQ62504 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.97■□□□□ 0.63
SpenQ62504 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.97■□□□□ 0.63
SpenQ62504 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SpenQ62504 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.96■□□□□ 0.63
SpenQ62504 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.96■□□□□ 0.63
SpenQ62504 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SpenQ62504 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SpenQ62504 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
SpenQ62504 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SpenQ62504 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SpenQ62504 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpenQ62504 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SpenQ62504 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpenQ62504 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpenQ62504 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.94■□□□□ 0.62
SpenQ62504 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SpenQ62504 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SpenQ62504 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpenQ62504 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SpenQ62504 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.94■□□□□ 0.62
SpenQ62504 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.94■□□□□ 0.62
SpenQ62504 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.93■□□□□ 0.62
SpenQ62504 Spcs1-204ENSMUST00000226782 949 ntBASIC18.93■□□□□ 0.62
SpenQ62504 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.93■□□□□ 0.62
SpenQ62504 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SpenQ62504 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SpenQ62504 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.92■□□□□ 0.62
SpenQ62504 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.92■□□□□ 0.62
SpenQ62504 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SpenQ62504 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SpenQ62504 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.91■□□□□ 0.62
SpenQ62504 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.91■□□□□ 0.62
SpenQ62504 Gm42569-201ENSMUST00000200539 472 ntBASIC18.91■□□□□ 0.62
SpenQ62504 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SpenQ62504 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SpenQ62504 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SpenQ62504 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SpenQ62504 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SpenQ62504 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SpenQ62504 Gm8493-201ENSMUST00000196881 489 ntBASIC18.9■□□□□ 0.62
SpenQ62504 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SpenQ62504 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
SpenQ62504 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.9■□□□□ 0.62
SpenQ62504 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SpenQ62504 Gm9870-201ENSMUST00000063874 645 ntBASIC18.9■□□□□ 0.62
SpenQ62504 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms