Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8d-2Q5R1B6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8d-2Q5R1B6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8d-2Q5R1B6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8d-2Q5R1B6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8d-2Q5R1B6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Gm43173-201ENSMUST00000202246 593 ntBASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8d-2Q5R1B6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8d-2Q5R1B6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Trav8d-2Q5R1B6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8d-2Q5R1B6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.65■□□□□ 0.9
Trav8d-2Q5R1B6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8d-2Q5R1B6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.64■□□□□ 0.9
Trav8d-2Q5R1B6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Gm7291-201ENSMUST00000199147 382 ntBASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8d-2Q5R1B6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Trav8d-2Q5R1B6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav8d-2Q5R1B6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.61■□□□□ 0.89
Trav8d-2Q5R1B6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8d-2Q5R1B6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8d-2Q5R1B6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8d-2Q5R1B6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8d-2Q5R1B6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav8d-2Q5R1B6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8d-2Q5R1B6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8d-2Q5R1B6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8d-2Q5R1B6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8d-2Q5R1B6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8d-2Q5R1B6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8d-2Q5R1B6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms