Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.37■■□□□ 1.01
Rnf43Q5NCP0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf43Q5NCP0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf43Q5NCP0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf43Q5NCP0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf43Q5NCP0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf43Q5NCP0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf43Q5NCP0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf43Q5NCP0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rnf43Q5NCP0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf43Q5NCP0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.29■■□□□ 1
Rnf43Q5NCP0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf43Q5NCP0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.28■■□□□ 1
Rnf43Q5NCP0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf43Q5NCP0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf43Q5NCP0 Gm43137-201ENSMUST00000198052 594 ntBASIC21.27■■□□□ 1
Rnf43Q5NCP0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.27■■□□□ 1
Rnf43Q5NCP0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf43Q5NCP0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms