Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Foxr1Q3UTB7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Foxr1Q3UTB7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Foxr1Q3UTB7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Foxr1Q3UTB7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Foxr1Q3UTB7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Foxr1Q3UTB7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Foxr1Q3UTB7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.39■■□□□ 1.01
Foxr1Q3UTB7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.39■■□□□ 1.01
Foxr1Q3UTB7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.39■■□□□ 1.01
Foxr1Q3UTB7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr1Q3UTB7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.38■■□□□ 1.01
Foxr1Q3UTB7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr1Q3UTB7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr1Q3UTB7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Foxr1Q3UTB7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.37■■□□□ 1.01
Foxr1Q3UTB7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Foxr1Q3UTB7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Foxr1Q3UTB7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.36■■□□□ 1.01
Foxr1Q3UTB7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxr1Q3UTB7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Foxr1Q3UTB7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Foxr1Q3UTB7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Foxr1Q3UTB7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxr1Q3UTB7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.33■■□□□ 1.01
Foxr1Q3UTB7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.33■■□□□ 1.01
Foxr1Q3UTB7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Foxr1Q3UTB7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Foxr1Q3UTB7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Foxr1Q3UTB7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Foxr1Q3UTB7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Foxr1Q3UTB7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr1Q3UTB7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr1Q3UTB7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr1Q3UTB7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.32■■□□□ 1
Foxr1Q3UTB7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr1Q3UTB7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Foxr1Q3UTB7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.32■■□□□ 1
Foxr1Q3UTB7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Foxr1Q3UTB7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Foxr1Q3UTB7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Foxr1Q3UTB7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Foxr1Q3UTB7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Foxr1Q3UTB7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxr1Q3UTB7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.3■■□□□ 1
Foxr1Q3UTB7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Foxr1Q3UTB7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.3■■□□□ 1
Foxr1Q3UTB7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.3■■□□□ 1
Foxr1Q3UTB7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.3■■□□□ 1
Foxr1Q3UTB7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.29■■□□□ 1
Foxr1Q3UTB7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.29■■□□□ 1
Foxr1Q3UTB7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Foxr1Q3UTB7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.29■■□□□ 1
Foxr1Q3UTB7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.29■■□□□ 1
Foxr1Q3UTB7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Foxr1Q3UTB7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Foxr1Q3UTB7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms