Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.29■■□□□ 1
Naf1Q3UMQ8 Gm13241-201ENSMUST00000094493 780 ntBASIC21.29■■□□□ 1
Naf1Q3UMQ8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.29■■□□□ 1
Naf1Q3UMQ8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Naf1Q3UMQ8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Naf1Q3UMQ8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.28■■□□□ 1
Naf1Q3UMQ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Naf1Q3UMQ8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.28■■□□□ 1
Naf1Q3UMQ8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Naf1Q3UMQ8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Gm12922-201ENSMUST00000120626 809 ntBASIC21.27■■□□□ 1
Naf1Q3UMQ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Naf1Q3UMQ8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Naf1Q3UMQ8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Naf1Q3UMQ8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.25■□□□□ 0.99
Naf1Q3UMQ8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Naf1Q3UMQ8 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Naf1Q3UMQ8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Naf1Q3UMQ8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Naf1Q3UMQ8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Naf1Q3UMQ8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Naf1Q3UMQ8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Naf1Q3UMQ8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Naf1Q3UMQ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms