Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smu1Q3UKJ7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smu1Q3UKJ7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smu1Q3UKJ7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Smu1Q3UKJ7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smu1Q3UKJ7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smu1Q3UKJ7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Smu1Q3UKJ7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Smu1Q3UKJ7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smu1Q3UKJ7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smu1Q3UKJ7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smu1Q3UKJ7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smu1Q3UKJ7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smu1Q3UKJ7 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Smu1Q3UKJ7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20■□□□□ 0.79
Smu1Q3UKJ7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smu1Q3UKJ7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smu1Q3UKJ7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smu1Q3UKJ7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smu1Q3UKJ7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gm12366-201ENSMUST00000121722 873 ntBASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gm5786-201ENSMUST00000085368 882 ntBASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smu1Q3UKJ7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smu1Q3UKJ7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smu1Q3UKJ7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Mir6538-201ENSMUST00000183713 110 ntBASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smu1Q3UKJ7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smu1Q3UKJ7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smu1Q3UKJ7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms