Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnrc6aQ3UHK8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnrc6aQ3UHK8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.62■□□□□ 0.73
Tnrc6aQ3UHK8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnrc6aQ3UHK8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnrc6aQ3UHK8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnrc6aQ3UHK8 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnrc6aQ3UHK8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnrc6aQ3UHK8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.58■□□□□ 0.73
Tnrc6aQ3UHK8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnrc6aQ3UHK8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnrc6aQ3UHK8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnrc6aQ3UHK8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.58■□□□□ 0.72
Tnrc6aQ3UHK8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tnrc6aQ3UHK8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.58■□□□□ 0.72
Tnrc6aQ3UHK8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Tnrc6aQ3UHK8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnrc6aQ3UHK8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnrc6aQ3UHK8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tnrc6aQ3UHK8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnrc6aQ3UHK8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnrc6aQ3UHK8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnrc6aQ3UHK8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnrc6aQ3UHK8 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnrc6aQ3UHK8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnrc6aQ3UHK8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnrc6aQ3UHK8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnrc6aQ3UHK8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnrc6aQ3UHK8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnrc6aQ3UHK8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Tnrc6aQ3UHK8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Tnrc6aQ3UHK8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnrc6aQ3UHK8 Gm18284-201ENSMUST00000172604 624 ntBASIC19.52■□□□□ 0.71
Tnrc6aQ3UHK8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Tnrc6aQ3UHK8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnrc6aQ3UHK8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tnrc6aQ3UHK8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnrc6aQ3UHK8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnrc6aQ3UHK8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnrc6aQ3UHK8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnrc6aQ3UHK8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnrc6aQ3UHK8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnrc6aQ3UHK8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms