Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim72Q1XH17 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim72Q1XH17 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.37■■□□□ 1.17
Trim72Q1XH17 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim72Q1XH17 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim72Q1XH17 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.37■■□□□ 1.17
Trim72Q1XH17 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim72Q1XH17 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.36■■□□□ 1.17
Trim72Q1XH17 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trim72Q1XH17 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim72Q1XH17 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim72Q1XH17 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim72Q1XH17 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Trim72Q1XH17 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim72Q1XH17 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim72Q1XH17 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Trim72Q1XH17 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Trim72Q1XH17 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim72Q1XH17 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim72Q1XH17 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim72Q1XH17 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim72Q1XH17 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim72Q1XH17 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trim72Q1XH17 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim72Q1XH17 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim72Q1XH17 Gm10399-202ENSMUST00000202768 748 ntBASIC22.3■■□□□ 1.16
Trim72Q1XH17 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Trim72Q1XH17 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim72Q1XH17 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim72Q1XH17 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trim72Q1XH17 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.28■■□□□ 1.16
Trim72Q1XH17 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim72Q1XH17 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim72Q1XH17 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim72Q1XH17 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim72Q1XH17 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.27■■□□□ 1.16
Trim72Q1XH17 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim72Q1XH17 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trim72Q1XH17 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.26■■□□□ 1.15
Trim72Q1XH17 Gm5812-201ENSMUST00000061073 957 ntBASIC22.26■■□□□ 1.15
Trim72Q1XH17 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Trim72Q1XH17 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.26■■□□□ 1.15
Trim72Q1XH17 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim72Q1XH17 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.25■■□□□ 1.15
Trim72Q1XH17 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim72Q1XH17 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim72Q1XH17 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms