Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc4Q08624 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.32■□□□□ 0.84
Hoxc4Q08624 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc4Q08624 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc4Q08624 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.32■□□□□ 0.84
Hoxc4Q08624 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc4Q08624 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Hoxc4Q08624 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.31■□□□□ 0.84
Hoxc4Q08624 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.31■□□□□ 0.84
Hoxc4Q08624 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxc4Q08624 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.31■□□□□ 0.84
Hoxc4Q08624 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hoxc4Q08624 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc4Q08624 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.29■□□□□ 0.84
Hoxc4Q08624 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxc4Q08624 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc4Q08624 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc4Q08624 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc4Q08624 Gm7143-201ENSMUST00000222811 859 ntBASIC20.28■□□□□ 0.84
Hoxc4Q08624 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hoxc4Q08624 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.28■□□□□ 0.84
Hoxc4Q08624 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hoxc4Q08624 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc4Q08624 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc4Q08624 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc4Q08624 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Hoxc4Q08624 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.25■□□□□ 0.83
Hoxc4Q08624 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.25■□□□□ 0.83
Hoxc4Q08624 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc4Q08624 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc4Q08624 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc4Q08624 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxc4Q08624 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc4Q08624 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc4Q08624 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hoxc4Q08624 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxc4Q08624 Gm12821-201ENSMUST00000120022 600 ntBASIC20.22■□□□□ 0.83
Hoxc4Q08624 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.22■□□□□ 0.83
Hoxc4Q08624 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.22■□□□□ 0.83
Hoxc4Q08624 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxc4Q08624 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Hoxc4Q08624 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.21■□□□□ 0.83
Hoxc4Q08624 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc4Q08624 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc4Q08624 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc4Q08624 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.19■□□□□ 0.82
Hoxc4Q08624 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.19■□□□□ 0.82
Hoxc4Q08624 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc4Q08624 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc4Q08624 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Hoxc4Q08624 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc4Q08624 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc4Q08624 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.18■□□□□ 0.82
Hoxc4Q08624 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.18■□□□□ 0.82
Hoxc4Q08624 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc4Q08624 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxc4Q08624 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms