Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.73■□□□□ 0.59
Abcd3P55096 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcd3P55096 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.72■□□□□ 0.59
Abcd3P55096 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcd3P55096 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Abcd3P55096 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd3P55096 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd3P55096 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd3P55096 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd3P55096 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Abcd3P55096 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.71■□□□□ 0.59
Abcd3P55096 Gm5921-201ENSMUST00000075898 882 ntBASIC18.71■□□□□ 0.59
Abcd3P55096 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abcd3P55096 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.71■□□□□ 0.59
Abcd3P55096 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.71■□□□□ 0.58
Abcd3P55096 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Abcd3P55096 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Abcd3P55096 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.7■□□□□ 0.58
Abcd3P55096 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Abcd3P55096 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.7■□□□□ 0.58
Abcd3P55096 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Abcd3P55096 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abcd3P55096 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Abcd3P55096 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Abcd3P55096 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abcd3P55096 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd3P55096 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.68■□□□□ 0.58
Abcd3P55096 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd3P55096 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd3P55096 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd3P55096 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcd3P55096 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.67■□□□□ 0.58
Abcd3P55096 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Gm13238-201ENSMUST00000117655 780 ntBASIC18.67■□□□□ 0.58
Abcd3P55096 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.67■□□□□ 0.58
Abcd3P55096 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.67■□□□□ 0.58
Abcd3P55096 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcd3P55096 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd3P55096 Gm43566-201ENSMUST00000196851 808 ntBASIC18.66■□□□□ 0.58
Abcd3P55096 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcd3P55096 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Abcd3P55096 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.65■□□□□ 0.58
Abcd3P55096 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Abcd3P55096 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcd3P55096 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abcd3P55096 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abcd3P55096 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd3P55096 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Abcd3P55096 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd3P55096 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.64■□□□□ 0.57
Abcd3P55096 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcd3P55096 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.64■□□□□ 0.57
Abcd3P55096 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.64■□□□□ 0.57
Abcd3P55096 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Abcd3P55096 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.63■□□□□ 0.57
Abcd3P55096 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd3P55096 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Abcd3P55096 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd3P55096 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd3P55096 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd3P55096 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Abcd3P55096 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcd3P55096 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Abcd3P55096 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Abcd3P55096 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.62■□□□□ 0.57
Abcd3P55096 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Abcd3P55096 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcd3P55096 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcd3P55096 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcd3P55096 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Abcd3P55096 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd3P55096 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcd3P55096 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms