Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SftpbP50405 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SftpbP50405 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.33■■□□□ 1.01
SftpbP50405 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SftpbP50405 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SftpbP50405 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
SftpbP50405 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SftpbP50405 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.33■■□□□ 1
SftpbP50405 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.32■■□□□ 1
SftpbP50405 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.32■■□□□ 1
SftpbP50405 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.32■■□□□ 1
SftpbP50405 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.32■■□□□ 1
SftpbP50405 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SftpbP50405 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SftpbP50405 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SftpbP50405 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.31■■□□□ 1
SftpbP50405 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.31■■□□□ 1
SftpbP50405 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.31■■□□□ 1
SftpbP50405 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.31■■□□□ 1
SftpbP50405 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SftpbP50405 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.31■■□□□ 1
SftpbP50405 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SftpbP50405 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
SftpbP50405 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.3■■□□□ 1
SftpbP50405 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.3■■□□□ 1
SftpbP50405 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SftpbP50405 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.29■■□□□ 1
SftpbP50405 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.29■■□□□ 1
SftpbP50405 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SftpbP50405 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.29■■□□□ 1
SftpbP50405 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SftpbP50405 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SftpbP50405 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SftpbP50405 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SftpbP50405 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SftpbP50405 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SftpbP50405 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.28■■□□□ 1
SftpbP50405 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.28■■□□□ 1
SftpbP50405 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.27■■□□□ 1
SftpbP50405 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SftpbP50405 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.27■■□□□ 1
SftpbP50405 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.27■■□□□ 1
SftpbP50405 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SftpbP50405 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.27■■□□□ 1
SftpbP50405 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SftpbP50405 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SftpbP50405 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.26■□□□□ 0.99
SftpbP50405 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.26■□□□□ 0.99
SftpbP50405 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SftpbP50405 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.26■□□□□ 0.99
SftpbP50405 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.25■□□□□ 0.99
SftpbP50405 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.25■□□□□ 0.99
SftpbP50405 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SftpbP50405 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.25■□□□□ 0.99
SftpbP50405 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SftpbP50405 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SftpbP50405 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.24■□□□□ 0.99
SftpbP50405 Gm12366-201ENSMUST00000121722 873 ntBASIC21.24■□□□□ 0.99
SftpbP50405 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.24■□□□□ 0.99
SftpbP50405 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.24■□□□□ 0.99
SftpbP50405 Gm5786-201ENSMUST00000085368 882 ntBASIC21.24■□□□□ 0.99
SftpbP50405 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SftpbP50405 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SftpbP50405 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SftpbP50405 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SftpbP50405 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.23■□□□□ 0.99
SftpbP50405 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.23■□□□□ 0.99
SftpbP50405 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms