Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a11P31650 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a11P31650 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc6a11P31650 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slc6a11P31650 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc6a11P31650 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a11P31650 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Slc6a11P31650 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.75■□□□□ 0.75
Slc6a11P31650 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.75■□□□□ 0.75
Slc6a11P31650 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.75■□□□□ 0.75
Slc6a11P31650 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a11P31650 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a11P31650 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc6a11P31650 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Slc6a11P31650 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a11P31650 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slc6a11P31650 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a11P31650 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a11P31650 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Slc6a11P31650 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Slc6a11P31650 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Slc6a11P31650 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a11P31650 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc6a11P31650 Gm45102-201ENSMUST00000207427 857 ntBASIC19.72■□□□□ 0.75
Slc6a11P31650 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a11P31650 Notumos-201ENSMUST00000151998 2659 ntBASIC19.71■□□□□ 0.75
Slc6a11P31650 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a11P31650 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a11P31650 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a11P31650 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Slc6a11P31650 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slc6a11P31650 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a11P31650 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.7■□□□□ 0.74
Slc6a11P31650 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slc6a11P31650 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Gm45444-201ENSMUST00000211394 898 ntBASIC19.7■□□□□ 0.74
Slc6a11P31650 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.7■□□□□ 0.74
Slc6a11P31650 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a11P31650 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a11P31650 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a11P31650 Gm14117-201ENSMUST00000122417 843 ntBASIC19.69■□□□□ 0.74
Slc6a11P31650 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slc6a11P31650 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a11P31650 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc6a11P31650 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a11P31650 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.68■□□□□ 0.74
Slc6a11P31650 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a11P31650 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.67■□□□□ 0.74
Slc6a11P31650 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Slc6a11P31650 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
Slc6a11P31650 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Slc6a11P31650 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a11P31650 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a11P31650 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a11P31650 Gm13238-201ENSMUST00000117655 780 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms