Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nedd8P29595 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nedd8P29595 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nedd8P29595 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nedd8P29595 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nedd8P29595 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nedd8P29595 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nedd8P29595 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nedd8P29595 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nedd8P29595 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nedd8P29595 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Nedd8P29595 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nedd8P29595 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nedd8P29595 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nedd8P29595 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Nedd8P29595 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nedd8P29595 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nedd8P29595 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nedd8P29595 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nedd8P29595 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nedd8P29595 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
Nedd8P29595 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nedd8P29595 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd8P29595 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Nedd8P29595 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.24■□□□□ 0.67
Nedd8P29595 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nedd8P29595 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Nedd8P29595 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd8P29595 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nedd8P29595 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nedd8P29595 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nedd8P29595 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd8P29595 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd8P29595 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
Nedd8P29595 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nedd8P29595 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd8P29595 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.22■□□□□ 0.67
Nedd8P29595 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd8P29595 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd8P29595 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.21■□□□□ 0.67
Nedd8P29595 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.21■□□□□ 0.67
Nedd8P29595 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.21■□□□□ 0.67
Nedd8P29595 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd8P29595 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd8P29595 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Nedd8P29595 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd8P29595 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd8P29595 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nedd8P29595 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd8P29595 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd8P29595 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nedd8P29595 Gm45855-201ENSMUST00000212546 880 ntBASIC19.2■□□□□ 0.66
Nedd8P29595 Nkain2-201ENSMUST00000092602 558 ntBASIC19.2■□□□□ 0.66
Nedd8P29595 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.2■□□□□ 0.66
Nedd8P29595 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nedd8P29595 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nedd8P29595 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd8P29595 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd8P29595 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nedd8P29595 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nedd8P29595 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nedd8P29595 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nedd8P29595 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nedd8P29595 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nedd8P29595 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nedd8P29595 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms