Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.76■□□□□ 0.75
ApoeP08226 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.76■□□□□ 0.75
ApoeP08226 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ApoeP08226 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ApoeP08226 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ApoeP08226 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.75■□□□□ 0.75
ApoeP08226 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ApoeP08226 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ApoeP08226 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ApoeP08226 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ApoeP08226 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.74■□□□□ 0.75
ApoeP08226 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.74■□□□□ 0.75
ApoeP08226 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ApoeP08226 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ApoeP08226 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ApoeP08226 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.73■□□□□ 0.75
ApoeP08226 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ApoeP08226 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ApoeP08226 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ApoeP08226 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ApoeP08226 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ApoeP08226 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ApoeP08226 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ApoeP08226 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ApoeP08226 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ApoeP08226 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ApoeP08226 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ApoeP08226 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ApoeP08226 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ApoeP08226 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
ApoeP08226 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ApoeP08226 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ApoeP08226 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
ApoeP08226 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ApoeP08226 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
ApoeP08226 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.69■□□□□ 0.74
ApoeP08226 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ApoeP08226 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.68■□□□□ 0.74
ApoeP08226 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ApoeP08226 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ApoeP08226 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.67■□□□□ 0.74
ApoeP08226 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.67■□□□□ 0.74
ApoeP08226 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ApoeP08226 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ApoeP08226 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ApoeP08226 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ApoeP08226 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ApoeP08226 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ApoeP08226 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms