Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfrbP05622 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PdgfrbP05622 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PdgfrbP05622 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrbP05622 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PdgfrbP05622 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrbP05622 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PdgfrbP05622 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PdgfrbP05622 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
PdgfrbP05622 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.13■□□□□ 0.97
PdgfrbP05622 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrbP05622 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrbP05622 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.13■□□□□ 0.97
PdgfrbP05622 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PdgfrbP05622 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.12■□□□□ 0.97
PdgfrbP05622 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.12■□□□□ 0.97
PdgfrbP05622 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.12■□□□□ 0.97
PdgfrbP05622 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.12■□□□□ 0.97
PdgfrbP05622 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
PdgfrbP05622 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PdgfrbP05622 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PdgfrbP05622 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PdgfrbP05622 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.11■□□□□ 0.97
PdgfrbP05622 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PdgfrbP05622 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrbP05622 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrbP05622 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrbP05622 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PdgfrbP05622 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PdgfrbP05622 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrbP05622 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PdgfrbP05622 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
PdgfrbP05622 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.09■□□□□ 0.97
PdgfrbP05622 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PdgfrbP05622 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PdgfrbP05622 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PdgfrbP05622 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
PdgfrbP05622 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PdgfrbP05622 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PdgfrbP05622 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PdgfrbP05622 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PdgfrbP05622 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PdgfrbP05622 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PdgfrbP05622 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PdgfrbP05622 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PdgfrbP05622 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PdgfrbP05622 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PdgfrbP05622 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PdgfrbP05622 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PdgfrbP05622 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PdgfrbP05622 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.06■□□□□ 0.96
PdgfrbP05622 Gm10232-201ENSMUST00000089221 720 ntBASIC21.06■□□□□ 0.96
PdgfrbP05622 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PdgfrbP05622 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PdgfrbP05622 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PdgfrbP05622 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PdgfrbP05622 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PdgfrbP05622 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PdgfrbP05622 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PdgfrbP05622 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.04■□□□□ 0.96
PdgfrbP05622 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PdgfrbP05622 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PdgfrbP05622 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PdgfrbP05622 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PdgfrbP05622 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PdgfrbP05622 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PdgfrbP05622 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.03■□□□□ 0.96
PdgfrbP05622 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PdgfrbP05622 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PdgfrbP05622 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PdgfrbP05622 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PdgfrbP05622 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PdgfrbP05622 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PdgfrbP05622 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PdgfrbP05622 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PdgfrbP05622 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PdgfrbP05622 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.01■□□□□ 0.95
PdgfrbP05622 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PdgfrbP05622 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.01■□□□□ 0.95
PdgfrbP05622 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PdgfrbP05622 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms