Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hcn3O88705 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn3O88705 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn3O88705 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hcn3O88705 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn3O88705 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn3O88705 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hcn3O88705 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.95■□□□□ 0.78
Hcn3O88705 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hcn3O88705 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hcn3O88705 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
Hcn3O88705 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hcn3O88705 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hcn3O88705 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hcn3O88705 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hcn3O88705 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Hcn3O88705 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcn3O88705 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hcn3O88705 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.91■□□□□ 0.78
Hcn3O88705 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.91■□□□□ 0.78
Hcn3O88705 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcn3O88705 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hcn3O88705 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Hcn3O88705 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hcn3O88705 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcn3O88705 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Hcn3O88705 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hcn3O88705 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hcn3O88705 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Hcn3O88705 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn3O88705 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.88■□□□□ 0.77
Hcn3O88705 Mir6538-201ENSMUST00000183713 110 ntBASIC19.88■□□□□ 0.77
Hcn3O88705 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hcn3O88705 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn3O88705 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn3O88705 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hcn3O88705 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.87■□□□□ 0.77
Hcn3O88705 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Hcn3O88705 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcn3O88705 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hcn3O88705 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Hcn3O88705 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Hcn3O88705 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hcn3O88705 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn3O88705 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.85■□□□□ 0.77
Hcn3O88705 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn3O88705 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn3O88705 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.85■□□□□ 0.77
Hcn3O88705 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn3O88705 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.85■□□□□ 0.77
Hcn3O88705 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hcn3O88705 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcn3O88705 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms