Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abca4O35600 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abca4O35600 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Abca4O35600 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Abca4O35600 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.2■□□□□ 0.82
Abca4O35600 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.2■□□□□ 0.82
Abca4O35600 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.2■□□□□ 0.82
Abca4O35600 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Abca4O35600 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Abca4O35600 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Abca4O35600 Gm40848-201ENSMUST00000221998 324 ntBASIC20.2■□□□□ 0.82
Abca4O35600 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abca4O35600 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abca4O35600 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abca4O35600 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.19■□□□□ 0.82
Abca4O35600 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.19■□□□□ 0.82
Abca4O35600 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Abca4O35600 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Abca4O35600 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Abca4O35600 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.18■□□□□ 0.82
Abca4O35600 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.18■□□□□ 0.82
Abca4O35600 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Abca4O35600 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Abca4O35600 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.17■□□□□ 0.82
Abca4O35600 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abca4O35600 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Abca4O35600 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.16■□□□□ 0.82
Abca4O35600 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Abca4O35600 Gm18671-201ENSMUST00000214826 683 ntBASIC20.16■□□□□ 0.82
Abca4O35600 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abca4O35600 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Abca4O35600 Gm10653-202ENSMUST00000139570 835 ntBASIC20.15■□□□□ 0.82
Abca4O35600 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.15■□□□□ 0.82
Abca4O35600 Gm7143-201ENSMUST00000222811 859 ntBASIC20.15■□□□□ 0.82
Abca4O35600 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Abca4O35600 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Abca4O35600 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.14■□□□□ 0.81
Abca4O35600 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Abca4O35600 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abca4O35600 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Abca4O35600 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Abca4O35600 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Abca4O35600 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Abca4O35600 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abca4O35600 Gm12441-201ENSMUST00000121806 588 ntBASIC20.13■□□□□ 0.81
Abca4O35600 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.13■□□□□ 0.81
Abca4O35600 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.13■□□□□ 0.81
Abca4O35600 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Abca4O35600 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Abca4O35600 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Abca4O35600 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Abca4O35600 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Abca4O35600 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abca4O35600 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.11■□□□□ 0.81
Abca4O35600 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abca4O35600 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Abca4O35600 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.11■□□□□ 0.81
Abca4O35600 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Abca4O35600 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Abca4O35600 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
Abca4O35600 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abca4O35600 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Abca4O35600 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abca4O35600 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.1■□□□□ 0.81
Abca4O35600 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Abca4O35600 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.1■□□□□ 0.81
Abca4O35600 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Abca4O35600 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.09■□□□□ 0.81
Abca4O35600 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.09■□□□□ 0.81
Abca4O35600 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.09■□□□□ 0.81
Abca4O35600 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca4O35600 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.09■□□□□ 0.81
Abca4O35600 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca4O35600 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca4O35600 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.09■□□□□ 0.81
Abca4O35600 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca4O35600 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.09■□□□□ 0.81
Abca4O35600 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Abca4O35600 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca4O35600 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.08■□□□□ 0.81
Abca4O35600 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abca4O35600 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Abca4O35600 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.08■□□□□ 0.8
Abca4O35600 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.08■□□□□ 0.8
Abca4O35600 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.07■□□□□ 0.8
Abca4O35600 Smad6-203ENSMUST00000179458 273 ntBASIC20.07■□□□□ 0.8
Abca4O35600 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.07■□□□□ 0.8
Abca4O35600 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abca4O35600 Gm42778-201ENSMUST00000199644 553 ntBASIC20.07■□□□□ 0.8
Abca4O35600 Amer2-203ENSMUST00000225247 2662 ntBASIC20.06■□□□□ 0.8
Abca4O35600 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abca4O35600 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abca4O35600 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abca4O35600 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.06■□□□□ 0.8
Abca4O35600 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abca4O35600 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.06■□□□□ 0.8
Abca4O35600 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Abca4O35600 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Abca4O35600 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.05■□□□□ 0.8
Abca4O35600 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms