Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.59■□□□□ 0.73
Cx3cl1O35188 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cl1O35188 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cl1O35188 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cl1O35188 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cl1O35188 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cl1O35188 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 Gm10399-202ENSMUST00000202768 748 ntBASIC19.58■□□□□ 0.72
Cx3cl1O35188 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cl1O35188 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.57■□□□□ 0.72
Cx3cl1O35188 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cx3cl1O35188 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cl1O35188 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cl1O35188 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.55■□□□□ 0.72
Cx3cl1O35188 Gm9959-201ENSMUST00000068277 390 ntBASIC19.55■□□□□ 0.72
Cx3cl1O35188 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cl1O35188 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cl1O35188 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cl1O35188 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Gm45102-201ENSMUST00000207427 857 ntBASIC19.53■□□□□ 0.72
Cx3cl1O35188 Rps24-207ENSMUST00000224568 714 ntBASIC19.53■□□□□ 0.72
Cx3cl1O35188 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cl1O35188 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cx3cl1O35188 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.52■□□□□ 0.72
Cx3cl1O35188 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cx3cl1O35188 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.52■□□□□ 0.72
Cx3cl1O35188 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Gm40881-201ENSMUST00000223397 166 ntBASIC19.51■□□□□ 0.71
Cx3cl1O35188 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.51■□□□□ 0.71
Cx3cl1O35188 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cl1O35188 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.51■□□□□ 0.71
Cx3cl1O35188 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cl1O35188 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.51■□□□□ 0.71
Cx3cl1O35188 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Etf1-202ENSMUST00000180351 108 ntBASIC19.5■□□□□ 0.71
Cx3cl1O35188 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cl1O35188 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.49■□□□□ 0.71
Cx3cl1O35188 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cx3cl1O35188 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms