Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ercc2O08811 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.47■■□□□ 1.03
Ercc2O08811 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ercc2O08811 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.47■■□□□ 1.03
Ercc2O08811 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.46■■□□□ 1.03
Ercc2O08811 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Ercc2O08811 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ercc2O08811 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ercc2O08811 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ercc2O08811 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ercc2O08811 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ercc2O08811 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ercc2O08811 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ercc2O08811 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.44■■□□□ 1.02
Ercc2O08811 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ercc2O08811 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ercc2O08811 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.44■■□□□ 1.02
Ercc2O08811 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.44■■□□□ 1.02
Ercc2O08811 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.44■■□□□ 1.02
Ercc2O08811 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ercc2O08811 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.44■■□□□ 1.02
Ercc2O08811 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ercc2O08811 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ercc2O08811 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.43■■□□□ 1.02
Ercc2O08811 Gm15820-201ENSMUST00000201566 728 ntBASIC21.43■■□□□ 1.02
Ercc2O08811 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ercc2O08811 Gm15546-201ENSMUST00000122095 826 ntBASIC21.42■■□□□ 1.02
Ercc2O08811 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.42■■□□□ 1.02
Ercc2O08811 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ercc2O08811 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ercc2O08811 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ercc2O08811 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ercc2O08811 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ercc2O08811 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Ercc2O08811 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.41■■□□□ 1.02
Ercc2O08811 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ercc2O08811 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.41■■□□□ 1.02
Ercc2O08811 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.41■■□□□ 1.02
Ercc2O08811 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ercc2O08811 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ercc2O08811 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ercc2O08811 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ercc2O08811 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
Ercc2O08811 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ercc2O08811 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc2O08811 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ercc2O08811 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc2O08811 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc2O08811 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc2O08811 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ercc2O08811 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.39■■□□□ 1.01
Ercc2O08811 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ercc2O08811 Gm10399-202ENSMUST00000202768 748 ntBASIC21.39■■□□□ 1.01
Ercc2O08811 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ercc2O08811 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ercc2O08811 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ercc2O08811 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
Ercc2O08811 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.37■■□□□ 1.01
Ercc2O08811 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ercc2O08811 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ercc2O08811 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ercc2O08811 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ercc2O08811 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.37■■□□□ 1.01
Ercc2O08811 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ercc2O08811 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.36■■□□□ 1.01
Ercc2O08811 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.36■■□□□ 1.01
Ercc2O08811 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ercc2O08811 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Ercc2O08811 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ercc2O08811 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ercc2O08811 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ercc2O08811 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ercc2O08811 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms