Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf3O08791 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.7■■□□□ 1.06
Ebf3O08791 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.7■■□□□ 1.06
Ebf3O08791 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf3O08791 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf3O08791 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf3O08791 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ebf3O08791 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ebf3O08791 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
Ebf3O08791 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.69■■□□□ 1.06
Ebf3O08791 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ebf3O08791 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ebf3O08791 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ebf3O08791 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ebf3O08791 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf3O08791 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf3O08791 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf3O08791 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Ebf3O08791 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ebf3O08791 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Ebf3O08791 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf3O08791 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf3O08791 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf3O08791 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ebf3O08791 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ebf3O08791 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf3O08791 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf3O08791 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.65■■□□□ 1.06
Ebf3O08791 Gm12821-201ENSMUST00000120022 600 ntBASIC21.65■■□□□ 1.06
Ebf3O08791 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.65■■□□□ 1.06
Ebf3O08791 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf3O08791 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf3O08791 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.65■■□□□ 1.06
Ebf3O08791 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ebf3O08791 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ebf3O08791 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.64■■□□□ 1.05
Ebf3O08791 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ebf3O08791 Golgb1-201ENSMUST00000023534 498 ntBASIC21.64■■□□□ 1.05
Ebf3O08791 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ebf3O08791 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.63■■□□□ 1.05
Ebf3O08791 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.63■■□□□ 1.05
Ebf3O08791 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ebf3O08791 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ebf3O08791 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.63■■□□□ 1.05
Ebf3O08791 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.62■■□□□ 1.05
Ebf3O08791 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf3O08791 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf3O08791 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.62■■□□□ 1.05
Ebf3O08791 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.62■■□□□ 1.05
Ebf3O08791 Gm27454-201ENSMUST00000185090 204 ntBASIC21.62■■□□□ 1.05
Ebf3O08791 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.62■■□□□ 1.05
Ebf3O08791 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Ebf3O08791 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf3O08791 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf3O08791 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ebf3O08791 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf3O08791 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ebf3O08791 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf3O08791 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf3O08791 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.61■■□□□ 1.05
Ebf3O08791 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf3O08791 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ebf3O08791 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ebf3O08791 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Ebf3O08791 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ebf3O08791 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ebf3O08791 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ebf3O08791 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
Ebf3O08791 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ebf3O08791 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ebf3O08791 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.58■■□□□ 1.05
Ebf3O08791 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ebf3O08791 Gm45417-201ENSMUST00000209533 758 ntBASIC21.58■■□□□ 1.05
Ebf3O08791 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ebf3O08791 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ebf3O08791 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ebf3O08791 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ebf3O08791 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ebf3O08791 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ebf3O08791 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms