Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tnfrsf11bO08712 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf11bO08712 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf11bO08712 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf11bO08712 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf11bO08712 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf11bO08712 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf11bO08712 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf11bO08712 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf11bO08712 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf11bO08712 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf11bO08712 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf11bO08712 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf11bO08712 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Tnfrsf11bO08712 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.15■□□□□ 0.98
Tnfrsf11bO08712 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tnfrsf11bO08712 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Tnfrsf11bO08712 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf11bO08712 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf11bO08712 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms