Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm12887B1AVM1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm12887B1AVM1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Gm12887B1AVM1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm12887B1AVM1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm12887B1AVM1 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.83■□□□□ 0.28
Gm12887B1AVM1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm12887B1AVM1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm12887B1AVM1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm12887B1AVM1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm12887B1AVM1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm12887B1AVM1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.81■□□□□ 0.28
Gm12887B1AVM1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm12887B1AVM1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm12887B1AVM1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm12887B1AVM1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm12887B1AVM1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm12887B1AVM1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm12887B1AVM1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms