Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Gm7291-201ENSMUST00000199147 382 ntBASIC17.69■□□□□ 0.42
Col6a4A2AX52 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.69■□□□□ 0.42
Col6a4A2AX52 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a4A2AX52 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a4A2AX52 Gm8493-201ENSMUST00000196881 489 ntBASIC17.67■□□□□ 0.42
Col6a4A2AX52 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.67■□□□□ 0.42
Col6a4A2AX52 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.67■□□□□ 0.42
Col6a4A2AX52 Gm43173-201ENSMUST00000202246 593 ntBASIC17.67■□□□□ 0.42
Col6a4A2AX52 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a4A2AX52 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.66■□□□□ 0.42
Col6a4A2AX52 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col6a4A2AX52 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a4A2AX52 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a4A2AX52 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.65■□□□□ 0.42
Col6a4A2AX52 Gm10493-201ENSMUST00000097270 612 ntBASIC17.65■□□□□ 0.42
Col6a4A2AX52 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a4A2AX52 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a4A2AX52 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Gm12251-201ENSMUST00000117893 792 ntBASIC17.64■□□□□ 0.41
Col6a4A2AX52 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a4A2AX52 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a4A2AX52 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a4A2AX52 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a4A2AX52 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a4A2AX52 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Col6a4A2AX52 Gm10849-201ENSMUST00000100397 618 ntBASIC17.62■□□□□ 0.41
Col6a4A2AX52 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a4A2AX52 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a4A2AX52 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col6a4A2AX52 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.6■□□□□ 0.41
Col6a4A2AX52 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.6■□□□□ 0.41
Col6a4A2AX52 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Gm9870-201ENSMUST00000063874 645 ntBASIC17.59■□□□□ 0.41
Col6a4A2AX52 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col6a4A2AX52 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.59■□□□□ 0.41
Col6a4A2AX52 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.59■□□□□ 0.41
Col6a4A2AX52 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col6a4A2AX52 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.59■□□□□ 0.41
Col6a4A2AX52 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.59■□□□□ 0.41
Col6a4A2AX52 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms