Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Gm5786-201ENSMUST00000085368 882 ntBASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc112A0AUP1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc112A0AUP1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ccdc112A0AUP1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc112A0AUP1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc112A0AUP1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.83■■□□□ 1.4
Ccdc112A0AUP1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc112A0AUP1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc112A0AUP1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Gm10420-201ENSMUST00000121713 882 ntBASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.81■■□□□ 1.4
Ccdc112A0AUP1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc112A0AUP1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc112A0AUP1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc112A0AUP1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc112A0AUP1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc112A0AUP1 Mir6538-201ENSMUST00000183713 110 ntBASIC23.78■■□□□ 1.4
Ccdc112A0AUP1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc112A0AUP1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc112A0AUP1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc112A0AUP1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc112A0AUP1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Ccdc112A0AUP1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc112A0AUP1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.75■■□□□ 1.39
Ccdc112A0AUP1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc112A0AUP1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc112A0AUP1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms