Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Nkain2-201ENSMUST00000092602 558 ntBASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-3A0A0B4J1K1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Iqck-206ENSMUST00000208658 2891 ntBASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm9812-201ENSMUST00000061934 968 ntBASIC14.21□□□□□ -0.13
Trav4-3A0A0B4J1K1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-3A0A0B4J1K1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-3A0A0B4J1K1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-3A0A0B4J1K1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-3A0A0B4J1K1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav4-3A0A0B4J1K1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm45855-201ENSMUST00000212546 880 ntBASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-3A0A0B4J1K1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-3A0A0B4J1K1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-3A0A0B4J1K1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms