Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4d-3A0A075B625 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Gm9397-201ENSMUST00000200125 605 ntBASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4d-3A0A075B625 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4d-3A0A075B625 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav4d-3A0A075B625 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4d-3A0A075B625 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4d-3A0A075B625 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav4d-3A0A075B625 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4d-3A0A075B625 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav4d-3A0A075B625 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4d-3A0A075B625 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4d-3A0A075B625 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms