Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm26035-201ENSMUST00000083065 308 ntBASIC13.95□□□□□ -0.18
AmfrQ9R049 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AmfrQ9R049 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AmfrQ9R049 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm15198-201ENSMUST00000117283 177 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm14704-201ENSMUST00000120300 874 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm27501-201ENSMUST00000183599 107 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm45930-201ENSMUST00000221330 292 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AmfrQ9R049 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.94□□□□□ -0.18
AmfrQ9R049 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.94□□□□□ -0.18
AmfrQ9R049 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.93□□□□□ -0.18
AmfrQ9R049 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.93□□□□□ -0.18
AmfrQ9R049 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Gm6007-201ENSMUST00000208170 823 ntBASIC13.93□□□□□ -0.18
AmfrQ9R049 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AmfrQ9R049 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
AmfrQ9R049 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
AmfrQ9R049 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.92□□□□□ -0.18
AmfrQ9R049 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AmfrQ9R049 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms