Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco4Q9JIS3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Smco4Q9JIS3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms