Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Gm6244-201ENSMUST00000178732 841 ntBASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Proscos-202ENSMUST00000178990 666 ntBASIC12.31□□□□□ -0.44
Lima1Q9ERG0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lima1Q9ERG0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm8213-201ENSMUST00000118191 441 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm10156-201ENSMUST00000122364 462 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Mir1894-201ENSMUST00000122802 81 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm9002-201ENSMUST00000178437 499 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gm10012-201ENSMUST00000078252 192 ntBASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lima1Q9ERG0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gm15806-201ENSMUST00000120696 955 ntBASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gm27892-201ENSMUST00000185017 106 ntBASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gm17794-201ENSMUST00000220252 955 ntBASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gm5356-201ENSMUST00000093326 615 ntBASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lima1Q9ERG0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms