Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm15808-201ENSMUST00000119046 604 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm4857-201ENSMUST00000192718 785 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm10434-201ENSMUST00000101158 471 ntBASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm5904-201ENSMUST00000210286 865 ntBASIC11.6□□□□□ -0.55
Cdc40Q9DC48 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdc40Q9DC48 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm20482-202ENSMUST00000174729 825 ntBASIC11.59□□□□□ -0.55
Cdc40Q9DC48 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms