Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3a3Q9D554 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Mir686-201ENSMUST00000102174 109 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm27525-201ENSMUST00000184465 107 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm26315-201ENSMUST00000083890 321 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3a3Q9D554 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3a3Q9D554 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gm13813-201ENSMUST00000120998 787 ntBASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gm7063-201ENSMUST00000186840 981 ntBASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3a3Q9D554 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms