Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Gm6222-202ENSMUST00000182143 629 ntBASIC13.7□□□□□ -0.22
Cfap53Q9D439 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Snora73a-201ENSMUST00000082453 205 ntBASIC13.7□□□□□ -0.22
Cfap53Q9D439 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cfap53Q9D439 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.69□□□□□ -0.22
Cfap53Q9D439 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm9630-201ENSMUST00000178304 885 ntBASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.69□□□□□ -0.22
Cfap53Q9D439 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm22058-201ENSMUST00000083393 310 ntBASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cfap53Q9D439 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.68□□□□□ -0.22
Cfap53Q9D439 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm45925-201ENSMUST00000218882 744 ntBASIC13.68□□□□□ -0.22
Cfap53Q9D439 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cfap53Q9D439 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms