Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rita1Q9D1H0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm6963-201ENSMUST00000147879 379 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm44262-201ENSMUST00000204969 372 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rita1Q9D1H0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.43□□□□□ -0.58
Rita1Q9D1H0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms