Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Krt88Q9CPR6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm24694-201ENSMUST00000180054 110 ntBASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm27663-201ENSMUST00000184839 110 ntBASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm19220-201ENSMUST00000222682 803 ntBASIC11.23□□□□□ -0.61
Krt88Q9CPR6 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Krt88Q9CPR6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm15487-201ENSMUST00000122373 465 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Mir7684-201ENSMUST00000183858 60 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.22□□□□□ -0.61
Krt88Q9CPR6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Krt88Q9CPR6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms