Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm25043-201ENSMUST00000158604 212 ntBASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm9550-201ENSMUST00000161130 862 ntBASIC10.97□□□□□ -0.65
Scrt1Q99M85 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.97□□□□□ -0.65
Scrt1Q99M85 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.97□□□□□ -0.65
Scrt1Q99M85 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Scrt1Q99M85 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm22121-201ENSMUST00000175148 54 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm5051-201ENSMUST00000204085 485 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm44126-201ENSMUST00000204831 514 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 Gm8913-201ENSMUST00000209491 641 ntBASIC10.96□□□□□ -0.65
Scrt1Q99M85 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Scrt1Q99M85 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Scrt1Q99M85 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.96□□□□□ -0.66
Scrt1Q99M85 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Scrt1Q99M85 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.95□□□□□ -0.66
Scrt1Q99M85 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scrt1Q99M85 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms