Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcbQ99LF4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.33■□□□□ 0.05
RtcbQ99LF4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RtcbQ99LF4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.33■□□□□ 0.04
RtcbQ99LF4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.33■□□□□ 0.04
RtcbQ99LF4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
RtcbQ99LF4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcbQ99LF4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm11663-201ENSMUST00000117888 290 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm11451-201ENSMUST00000118946 630 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm12516-201ENSMUST00000120819 385 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Rprl1-201ENSMUST00000158050 327 ntBASIC15.32■□□□□ 0.04
RtcbQ99LF4 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcbQ99LF4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RtcbQ99LF4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.31■□□□□ 0.04
RtcbQ99LF4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Gm15595-201ENSMUST00000120840 961 ntBASIC15.31■□□□□ 0.04
RtcbQ99LF4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Mir6998-201ENSMUST00000183343 64 ntBASIC15.31■□□□□ 0.04
RtcbQ99LF4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.31■□□□□ 0.04
RtcbQ99LF4 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.31■□□□□ 0.04
RtcbQ99LF4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms