Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vmp1Q99KU0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.08□□□□□ -0.48
Vmp1Q99KU0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Gm5370-201ENSMUST00000187187 574 ntBASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vmp1Q99KU0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vmp1Q99KU0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vmp1Q99KU0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms