Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.35□□□□□ -0.11
Rfc4Q99J62 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc4Q99J62 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm10051-201ENSMUST00000145209 414 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm10179-201ENSMUST00000086233 688 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm21811-201ENSMUST00000096485 930 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.34□□□□□ -0.11
Rfc4Q99J62 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfc4Q99J62 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc4Q99J62 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rfc4Q99J62 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc4Q99J62 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm11941-201ENSMUST00000119904 610 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Mir7677-201ENSMUST00000184226 67 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm18304-201ENSMUST00000189162 546 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm44551-201ENSMUST00000208804 171 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm17827-201ENSMUST00000211825 742 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.33□□□□□ -0.12
Rfc4Q99J62 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc4Q99J62 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc4Q99J62 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms