Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb3Q91XZ7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb3Q91XZ7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm8581-201ENSMUST00000188636 890 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm17983-201ENSMUST00000190766 594 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb3Q91XZ7 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm15240-201ENSMUST00000118156 720 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm43433-201ENSMUST00000196573 481 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 AC154595.1-201ENSMUST00000225533 1059 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms