Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.24□□□□□ -0.13
Trex1Q91XB0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trex1Q91XB0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm14058-201ENSMUST00000116082 735 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm29787-201ENSMUST00000222129 849 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm270-201ENSMUST00000223010 976 ntBASIC14.23□□□□□ -0.13
Trex1Q91XB0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trex1Q91XB0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm13035-201ENSMUST00000117496 342 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm13045-201ENSMUST00000119019 712 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm19353-201ENSMUST00000184561 445 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.22□□□□□ -0.13
Trex1Q91XB0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trex1Q91XB0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trex1Q91XB0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms