Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.33□□□□□ -0.11
Ddx41Q91VN6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm12291-201ENSMUST00000121627 311 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm23363-201ENSMUST00000175024 79 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm26956-201ENSMUST00000182176 986 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm5904-201ENSMUST00000210286 865 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ddx41Q91VN6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm11531-201ENSMUST00000117614 555 ntBASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm5950-201ENSMUST00000213337 772 ntBASIC14.32□□□□□ -0.12
Ddx41Q91VN6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx41Q91VN6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm2546-201ENSMUST00000182630 991 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms