Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhb17Q91VD8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb17Q91VD8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Pcdhb17Q91VD8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb17Q91VD8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb17Q91VD8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm16479-201ENSMUST00000121706 932 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm14840-201ENSMUST00000122135 594 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm7029-201ENSMUST00000173226 450 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm26927-201ENSMUST00000182385 965 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm38201-201ENSMUST00000192143 387 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm44712-201ENSMUST00000206250 1076 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm43670-201ENSMUST00000199047 1767 ntBASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb17Q91VD8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm14021-201ENSMUST00000117683 961 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm13226-201ENSMUST00000117838 404 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Klra14-ps-201ENSMUST00000119532 802 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm11255-201ENSMUST00000120448 1180 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm3307-201ENSMUST00000176164 632 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm27682-201ENSMUST00000183930 110 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm29543-201ENSMUST00000188138 967 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm45784-201ENSMUST00000188360 142 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Gm19065-202ENSMUST00000203910 1165 ntBASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb17Q91VD8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms