Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Gm38092-201ENSMUST00000195600 653 ntBASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.45□□□□□ -0.74
H1fooQ8VIK3 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.45□□□□□ -0.74
H1fooQ8VIK3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H1fooQ8VIK3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Rmrp-201ENSMUST00000157463 271 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm19184-201ENSMUST00000196798 928 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H1fooQ8VIK3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Matn2-203ENSMUST00000226766 3252 ntBASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.43□□□□□ -0.74
H1fooQ8VIK3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms