Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm4271-201ENSMUST00000174444 973 ntBASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm9002-201ENSMUST00000178437 499 ntBASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm27892-201ENSMUST00000185017 106 ntBASIC12.89□□□□□ -0.35
Trim60Q8VI40 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm32025-201ENSMUST00000217960 307 ntBASIC12.89□□□□□ -0.35
Trim60Q8VI40 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.89□□□□□ -0.35
Trim60Q8VI40 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim60Q8VI40 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm14928-201ENSMUST00000120198 477 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm22331-201ENSMUST00000158066 136 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm6745-201ENSMUST00000199216 526 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm35960-201ENSMUST00000202712 767 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm29705-201ENSMUST00000212598 474 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm24136-201ENSMUST00000083374 165 ntBASIC12.88□□□□□ -0.35
Trim60Q8VI40 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim60Q8VI40 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms