Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm42937-201ENSMUST00000197360 752 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm44882-201ENSMUST00000205702 802 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpap2Q8VC34 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gm11531-201ENSMUST00000117614 555 ntBASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.66□□□□□ -0.22
Rpap2Q8VC34 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Rpap2Q8VC34 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Gm28882-201ENSMUST00000185504 314 ntBASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpap2Q8VC34 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms